Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence------MNSFMQQSLKMKKILMMSMCGALLLTGCNKTSQQDQTVSK-EQKSTAQKTTEQRDSSCLQ-----IMVAMHTINQNSKIEDLNQINEKLKTCVPSLKSEEQLKLIEASTAMYQRFLKQDYTDKTARAFEAFG--YAVLEQKQDLKKVIQSQ---KKLFAQLSPRDQYL------------------LQHEGQAYIELLYQGEGMFTYRRQPNYLIDVFSKALPADQKEFLSRMAKDNQDIFYNDGALAVSWKELTERALFWEKFIQKYPKSYFINDAKLLFNEY---RYFIFF------GLDNTPVSNEYAPNTWFDPDALQQIRFLSTQSQSSLAKPAQKFLKFIATPVDERNKQFKIDLTDENGQK----------KSTYQIVHEQLEQLLKFDSPWNTEIYRDCHIDAVCIDTN-----------------
3ZRH Chain:A ((2-449))LEVDFKKLKQIKNRMKKTDWLFLNACVGVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQRQDMLAILLTEVSQQAAKCIPAMVCPELTEQIRREIAASLHQRKGDFACYFLTDLVTFTLPADIEDLPPTVQEKLFDEVLDRDVQKELEEESPIINWSLELATRLDSRLYALWNRTAGDCLLDSVLQA--TWGIYDKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFG-LHFSLREEQWQEDWAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKTLGYTRFQGVYLPLLWEQSFCWKSPIALGYTR---------GHFSALVAMENDDVTITFLPLVDSERKLLHVHFLSAQELGNEEQQEKLLREWLDCCVTEGGVLVAMQKSSRRRNHPLVTQMVEKWLDRYRQIRP


General information:
TITO was launched using:
RESULT:

Template: 3ZRH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1550 75530 48.73 211.57
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 48.73
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.241

(partial model without unconserved sides chains):
PDB file : Tito_3ZRH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ZRH-query.scw
PDB file : Tito_Scwrl_3ZRH.pdb: