Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMSKALPIAVAVVLGGAALVPVYYATQHPTTEVGHKADKNASPIQKISYVLGYEVAQQTPPELDTKAFVQGIHDVRNKQPSAYTQEDLKAAVAAYEKELQQKMQHQDKPEQAGTATDSADAQFLAENKTKAGVKTTASGLQYIITKEGTGKQPTAQSIVKVHYEGRLINGQVFDSSYKRGQPVEFPL--NQVIPGWTEGLQLMKEGGKATFFIPSNLAYGPQELPG-IPANSTLIFDVELISVK
4DZ3 Chain:B ((3-113))-----------------------------------------------------------------------------------------------------------------------------------VVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGHVIKGWDEGVQGMKVGGVRRLTIPPQLGYGARGAGGVIPPNATLVFEVELLDV-


General information:
TITO was launched using:
RESULT:

Template: 4DZ3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 528 -12193 -23.09 -112.90
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -23.09
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.677

(partial model without unconserved sides chains):
PDB file : Tito_4DZ3.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4DZ3-query.scw
PDB file : Tito_Scwrl_4DZ3.pdb: