Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNFQRMTDLNLAGKRVLIREDLNVPVKNGVITSDARLRAALPTIKAALEKGA-AVMVFSHLGRPVEGEPKPEQ-SLAPVAAYLTEALGQEVKLFTDYLDGVEVE-------AGQVVLLENVRFNPGEK-----------KNNPELAQKYAA----LCDVFVMDAFGTAHRAEASTEGVARFAPVAAAGPLLAAELDALGRAMQTPEKPMVAIVAGSKVSTKLDVLNSLSGICDQLIVGGGIANTFLAA-AGYNVGKSLYEADLVETAKQIAAK-----VSVPLPTDVVVADASQINFEDFLGSLAAAQAVIKKVEDVTANDMILDVGPETAKAFANILTTSKTILWNGPVGVFEVDQFGEGTKALSLAVAQSDA---FSIAGGGDTLAAIDKYNVADQIGYISTGGGAFLEFVEGKTLPAVAVLLERA
3C39 Chain:B ((12-417))-----LDKLDVKGKRVVMRVDFNVPMKNNQITNNQRIKAAVPSIKFCLDNGAKSVVLMSHLGRP-DGVPMPDKYSLEPVAVELKSLLGKDVLFLKD-------EKACANPAAGSVILLENLRFHVEEEGKGKDASGNKVKAEPAKIEAFRASLSKLGDVYVNDAFGTAHRAHSSMVGVN--LPQKAGGFLMKKELNYFAKALESPERPFLAILGGAKVADKIQLINNMLDKVNEMIIGGGMAFTFLKVLNNMEIGTSLFDEEGAKIVKDLMSKAEKNGVKITLPVDFVTADKFDENAKTGQATVASG---------IPAGWMGLDCGPESSKKYAEAVTRAKQIVWNGPVGVFEWEAFARGTKALMDEVVKATSRGCITIIGG-------------DKVSHVSTGGGASLELLEGKVLPGVDAL----


General information:
TITO was launched using:
RESULT:

Template: 3C39.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1928 7034 3.65 19.87
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : 3.65
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.544

(partial model without unconserved sides chains):
PDB file : Tito_3C39.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3C39-query.scw
PDB file : Tito_Scwrl_3C39.pdb: