Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMCNKASSDLTDYVIRQLGRTKNKRYEAYVVSRIIHLLNDFTLKFVTQQFVRLSNKKIALTDLYFPQLGIHIEVDEGH-HFLRNSKMEYSLNQIDEPLY--S------ISQTESDAMREEDIISITGHKIFRVNVFKNQEGQPQNLENIHQQID----KIIEEIKTAKNKLIEASTFKEWNIETEYNPQTYIDLGRISLADNVVLKTTKDVCNCFGYSYKNYQRGGALHPYKKDTLIWFPRLYENKDWINTISPDGLTITEKSTDETITLKKLEEWKNGPQKRIVFARVKDNLSSRAMYRFMGLYEFQKADLKDGAVWKRVKCEVQTYSPKETKC
1VSR Chain:A ((7-122))-------------------------------RLASLLTGQGLAFRVQDAS----LP-GRPDFVVDEYRCVIFTHGCFWHHHHCYL-------FKVPATRTEFWLEKIGKNVERDRRDISR-LQELGWRVLIVWE-----------CALRGREKLTDEALTERLEEWICGEG-------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1VSR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 319 -16534 -51.83 -160.52
target 2D structure prediction score : 0.46
Monomeric hydrophicity matching model chain A : 0.56

3D Compatibility (PKB) : -51.83
2D Compatibility (Sec. Struct. Predict.) : 0.46
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.428

(partial model without unconserved sides chains):
PDB file : Tito_1VSR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1VSR-query.scw
PDB file : Tito_Scwrl_1VSR.pdb: