Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDTDPLVSCENLTSIVNLEHLMTTPVSFHPQAFIELALSRGVLKFGEFTLKSGRVSPYFFNAGLLNDGEALSLLAQGYADKLTQCE-NVDVIFGPAYKGIPFVAATAVALSQ---THNKSVPWGFNRKEAKDHGEGGVLVGAAVEGKKVWIIDDVITAGTAIREVVTILKNAGATIAGVLVALDRQERGQGE----LSAIQEVQKELEIPVHALITMKDLMDYLEAKGEKEALANMQAYREKYGI
2PRZ Chain:B ((8-223))----------------------------YQKNFLELAIECQALRFGSFKLKSGRESPYFFNLGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEA-------IIVGSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEVVSTDDKEGLSATQTVSKKYGIPVLSIVSLIHIITYLEGRITAEEKSKIEQYLQTYG-


General information:
TITO was launched using:
RESULT:

Template: 2PRZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 989 -46361 -46.88 -230.65
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -46.88
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.644

(partial model without unconserved sides chains):
PDB file : Tito_2PRZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2PRZ-query.scw
PDB file : Tito_Scwrl_2PRZ.pdb: