Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----MLYQYHC---ACCDKVVASTDKSCP--YCGSHHIRSPYGLWMFCVMACLAVVVVFKVVHLYIQNHQDTPVQSTLLDVLNEGDKSTKQ
5SVA Chain:T ((37-127))LSKVQLYEDLCRYEDTLSKLVESVDRFKPNLDIAKDLIRTDEALFENVKLLAEYDNIYRNLQKIDKDSEELDSKTRKILEILNECHDELKA


General information:
TITO was launched using:
RESULT:

Template: 5SVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain T - contact count / total energy / energy per contact / energy per residue : 103 -3677 -35.70 -44.84
target 2D structure prediction score : 0.59
Monomeric hydrophicity matching model chain T : 0.64

3D Compatibility (PKB) : -35.70
2D Compatibility (Sec. Struct. Predict.) : 0.59
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.128

(partial model without unconserved sides chains):
PDB file : Tito_5SVA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5SVA-query.scw
PDB file : Tito_Scwrl_5SVA.pdb: