Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKDIYVEFRGKYKVDGESRDSEHKGWLEVNSWSHNIRQPKSATSSSVGGHTAERVEHSDMVFVKDLDATSPKLWEACSAGYTFDEVQIDFYRANGDKRIKYLQIKLKHVLVSSVTPTVNE-E-GVPTEAFGLKYAAVEWTYNQQDINGTAKG-AVTKKWSLSNNTASYAA
3EAA Chain:A ((2-162))AFDTYIKLD-K--VDGESTDDKHKKWIEVLGFAWGAGNECTMESGT-QGLNTGKAMMSVLRVTKWMDCASVKLASAAVQGQNFPTLELEICTQA-GDKFAFCIYKFTHVAVSSYQCSGATGGSDRPQETIDFAYKEVTWEYVPQDQNGKAGGKIGPEGWSLITNKK----


General information:
TITO was launched using:
RESULT:

Template: 3EAA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 688 -43462 -63.17 -275.07
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.71

3D Compatibility (PKB) : -63.17
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.71
QMean score : 0.444

(partial model without unconserved sides chains):
PDB file : Tito_3EAA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EAA-query.scw
PDB file : Tito_Scwrl_3EAA.pdb: