Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDSNMEVLIKTEDAIDAYNGAANLARSLGVSRAAISQWGE--YVPEVSARGLVIL---QPSIPHIIKKPSAT
3BD1 Chain:A ((1-65))MN-------AIDIAINKLGSVSALAASLGVRQSAISNWRARGRVPAERCIDIERVTNGAVICRELRPDVFGA


General information:
TITO was launched using:
RESULT:

Template: 3BD1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 226 -25965 -114.89 -432.74
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -114.89
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.474

(partial model without unconserved sides chains):
PDB file : Tito_3BD1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3BD1-query.scw
PDB file : Tito_Scwrl_3BD1.pdb: