Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MFSIFYGKEKLAPSPNKIDILRSLVGGTVSIFILLWL-----SKLTHNIFIMAPFGATCVLLYTVSQSPLAQPRNIIFGHLISAFVGLFFLKFIGVSIF-----------------TIAFSVGCAIALMQVFKCVHPPAGANPLVILLTASSIHYEWNFLIFPVLVGAVSLVLVAMLINNIKASTKWPMYGLGILNTKK-- 2P4W Chain:B ((1-198)) MGEELNRLLDVLGNETRRRILFLLTKRPYFVSELSRELGVGQKAVLEHLRILEEAG---LIESRVEKIPRGRPRKYYMIKKGLRLEILLTPTLFGSEMYEAKGVRKSPEYEQAKELIKSQEPINVKMRELAEFLHELNERIREIIEEKRELEEARILIETYIENTMRRLAEENRQIIEEIFRDIEKILPPGYARSLKEKFL

General information: TITO was launched using: RESULT: Template: 2P4W.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 405 -35265 -87.07 -202.67 target 2D structure prediction score : 0.41 Monomeric hydrophicity matching model chain B : 0.57 3D Compatibility (PKB) : -87.07 2D Compatibility (Sec. Struct. Predict.) : 0.41 1D Compatibility (Hydrophobicity) : 0.57 QMean score : 0.125

(partial model without unconserved sides chains): PDB file : Tito_2P4W.pdb: (Unconserved sides chains are recalculated) : Sequence: align-2P4W-query.scw PDB file : Tito_Scwrl_2P4W.pdb: