Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---------------MSVVDFSQLPPPNLIKELDFEQI----------LAKRKERFISLFPTEQQLQWKEVLER-ESEPVTKLLEENAYMELILTNQINQDARALLLAFSSGSDLDHIAISYYGLKRLVITPANPNTVP-----PTAAVMETDENLKERCILSLSGLNTAGATNAYKFFAKSADGRVADASIISHEDNPCFLDVYITQHDSTNYEA-------SPDLINIVQKALDP-EDVRPVGDRPTVHSSKAVPYQIQARLYISQ-------TAENVMLLSVAKKRLEKYVENSKKIGQSIR-----RSAIYAALHVDGVSRV---EILNLTSDI---EISRSQHAFCTSLD-IQIGGTE------------------
5EC0 Chain:A ((1-388))MNISRMNVDFGNSMYMNLIDGYFFELPTNVVEISKEAAEGKFTSIVEDPADLKDRLLVSTVIDETERYFLVGELAEPELHNKVESHIPYVTFLAATAYYQALKGKREDNEVTIEYFQTMLPIWLLKKLDKFSEMQKRMASKFLGTHQVKVLTLGLEKELTIKVEDAACRIESEVARWAIKKNFDLEDKDYAEQFKNYDVVFCDLGGGTDDLVLLPAGLKPPKSRDSFVSNTAPFLAHLEKLRKEKLLEHFDSVRELEKFIYSNIGKTKMERRDGNTGQKFDLTDIIKKSLKEYTE--IKIAQAENTFPAPKDKVYKYLYFGGVGEVLEESISVVTEERYGRDISESNHIVAEDARLLNLYGLEVLSRAEQVKKQANEKEAQ


General information:
TITO was launched using:
RESULT:

Template: 5EC0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1375 83706 60.88 276.26
target 2D structure prediction score : 0.35
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 60.88
2D Compatibility (Sec. Struct. Predict.) : 0.35
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.104

(partial model without unconserved sides chains):
PDB file : Tito_5EC0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5EC0-query.scw
PDB file : Tito_Scwrl_5EC0.pdb: