Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMREKHYFNQDRNFWINVQQNDVLAVKNLKEEYGISDEMLTYSLDKNERARVEYDSFDEALLLVSNVPHQQKVDNHYETSPIAFILKEDGLFTFTTPNTEYVIRLIRSLLER-MPDMSVYSLLFRTLFLISDSFFPLIEEVNSERQRLNLKLREKT---TNKNLL-QLSDLEIGLVYLVTGTKQNVVLLEQIKALAIYRKLSEKEKEELDDALIEARQAVEMTNLASQILDQLSGTYNNLLNNNLNDTMKFLTVWSLILTVPTIVTGFFGMNLQLPFTHSVFGWGIALIISLVLSIWMLIALWRRIR
5N77 Chain:B ((19-257))----ESQPLVNAVWIDLVEPDDDERLRVQSELGQSLATRPELEDIEASARFFED--DDGLHIHSFFFFEDA-EDHAGNSTVAFTIRDGRLFTLRERELPAFRLYRMRARSQSMVDGNAYELLLDLFETKIEQLADEIENIYSDLEQLSRVIMEGHQGDEYDEALSTLAELEDIGWKVRLCLMDTQRALNFLVRKA---RLPGGQLEQAREILRDIESLLPHNESLFQKVNFLMQAAMGFINIEQNRIIK---------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5N77.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 925 -36740 -39.72 -157.01
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.56

3D Compatibility (PKB) : -39.72
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.56
QMean score : 0.568

(partial model without unconserved sides chains):
PDB file : Tito_5N77.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5N77-query.scw
PDB file : Tito_Scwrl_5N77.pdb: