Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNDEYKNDEDKMLFEEIENRCRLNFELRGKMSLIQQKKYLANKSEFTLGHVEKLIS----------DWISSRSEFTKIKQ---PIKFDMKKLLLNKSEIGNRDQYIRA--KGQEIIDSLGEMRSYNYLYVTHRADGMVITVGKSSSNDIFLDGDLFYQLNTNHLSGTEN--------------IILRTEYGNEIFAKYDEILKN--YLDWAWIIPVE------SGDAKKLERLLGDELINKKVPILNYYSHRQ------------
3A25 Chain:A ((29-301))IKPRIREILSKELPEELVKLLPKRWVRIGDVLLLPLRPELEPYKHRIAEVYAEVLGVKTVLRKGDYELLYGSDTVTVHVENGIKYKLDVAKIMFSPANVKERVRMAKVAKPDELVVDMFAGIGHL-SLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNELKIKRYAPGVWHVVLDLRVFKS


General information:
TITO was launched using:
RESULT:

Template: 3A25.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1104 2256 2.04 10.49
target 2D structure prediction score : 0.38
Monomeric hydrophicity matching model chain A : 0.65

3D Compatibility (PKB) : 2.04
2D Compatibility (Sec. Struct. Predict.) : 0.38
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.274

(partial model without unconserved sides chains):
PDB file : Tito_3A25.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3A25-query.scw
PDB file : Tito_Scwrl_3A25.pdb: