Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------MKTRGVNMANLVYSPKDILQQEFKTKMRGYDPVEVDEFLDN---------IIKDYETYSKELLALQEENDRLSAK--VAQLS------KTQGAAQTRVQQTEAPKSAAVTNFDILKR---LSNLEREVFGKKLDQQASAVKPAQPNPNNYTNADTSLDDNEKTRQF----------------------------------
4R33 Chain:A ((35-418))GDFVLPELEDVRAEAATVDTRAVLALAEGEEPAESRAAVALALWEDRSIGTAELQAAAEARCGARRPRLHTFVPLYTTNYCDSECKMCSMRKGNHRLDRKFSGRKEITEQLEILYHHEGVRGVGFLTGEYEDKHTRLASAFRIGWAIRTALDLGFERVYFNIGSMEQDEIDVLGEWIGREDPVTMCVFQESYDRETYRRFMGKTSVGVPKAD------------FDRRV-----VSFDRWLDAGYRYVNPGVLVGLHDDLSAELVSLVAHGDHLRSRGATADLSVPRMRPAMKSRDTTRVGDDDYLRLMSVVAFTCPEQRLVLTTREPQEFQDVALGLAGVISPGSPDVAPY-RAGCEARNDEKSSQFLVADLRRPRHILGRIEASGTPVDHFVNPAGEASR


General information:
TITO was launched using:
RESULT:

Template: 4R33.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 301 15747 52.31 123.02
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain A : 0.60

3D Compatibility (PKB) : 52.31
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.60
QMean score : 0.363

(partial model without unconserved sides chains):
PDB file : Tito_4R33.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4R33-query.scw
PDB file : Tito_Scwrl_4R33.pdb: