Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKKKQKQKLLNQFRPSLDGVRGQLFRSLEEESLRRYGL--------------------PLQVMLDPKNRQILTIGLAG----------KTNEDTRINVPIDDNFNTVLK----RIRSGE----------------NGIFE---RFRDNLLIEI-----VSYW-NDQRLKNDEP------------TAQAVATPVTEETVSVPEE------------KTEKPKADTTENTRSTDTNAALSFADFSKAVAEYPKFYTEQNEHEVVINEKNADEPRKLATISMTTENEFVIEKALERKYKVKL-------TLIPLIEQFAATAITDR-----------
2W0C Chain:L ((1-335))MIVKKKLAAGEFAETFKNGNNITIIKAVGELVLRAYGADGGEGLRTIVRQGVSIKGMNYTSVMLHTEYAQEIEYWVGDLDYSFQEQTTKSRDVNSFQIPLRDGVRELLPEDASRNRASIKSPVDIWIGGENMTALNGIVDGGRKFEAGQEFQINTFGSVNYWVSDEEIRVFKEYSARAKYAQNEGRTALEANNVPFFDIDVPPELDGVPFSLKARVRHKSKGVDGLGDYTSISVKPAFYITEGDETTDTLIKYTSYGSTGSHSGYDFDDNTLDVMVTLSAGVHRVFPVETELDYDAVQEVQHDWYDESFTTFIEVYSDDPLLTVKGYAQILMERT


General information:
TITO was launched using:
RESULT:

Template: 2W0C.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain L - contact count / total energy / energy per contact / energy per residue : 728 55275 75.93 236.22
target 2D structure prediction score : 0.39
Monomeric hydrophicity matching model chain L : 0.65

3D Compatibility (PKB) : 75.93
2D Compatibility (Sec. Struct. Predict.) : 0.39
1D Compatibility (Hydrophobicity) : 0.65
QMean score : -0.019

(partial model without unconserved sides chains):
PDB file : Tito_2W0C.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W0C-query.scw
PDB file : Tito_Scwrl_2W0C.pdb: