Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTDKQKIDEFFWNKTTPEVARDLLGMYLEHDTPEGRLAGYIVDAEAYLGPE-----DEAAHSYGLRRTPRVRAMY--EKPGTIYLYTMHTHRILNIITQPEGIPQGVMIRAIEPAAMIDQMSKNRGGKTGPDISNGPGKLVEALAIPQELYGQSIADSSLRLV----FEKKK---TPKKINALPRIGIPNKGVWTEKPLRFVVSGNPYISLQRKNQI-EKDWGWRKENEKEGSINIFR---
4HHT Chain:A ((1-229))-----GIDELYKKEFGIVAGVDEAS--------RGCLAGPVVAAAVVLEKEIEGINDSRLLDEIMEKAAVGIGIASPEEIDLYNIFNATKLAMNRALENLSVKPSFVLVDGKGIELSVPGTCLVKGDQ--------KSKLIGAASIVAKVFRDRLMSEFHRMYPQFSFHKHKGYATKEHLNEIRKNGVLPIHRLSFEPVLELLTDDLLREFFEKGLISENRFERILNLLGARKSVVFRKER


General information:
TITO was launched using:
RESULT:

Template: 4HHT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1102 -14697 -13.34 -72.75
target 2D structure prediction score : 0.47
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -13.34
2D Compatibility (Sec. Struct. Predict.) : 0.47
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.148

(partial model without unconserved sides chains):
PDB file : Tito_4HHT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HHT-query.scw
PDB file : Tito_Scwrl_4HHT.pdb: