Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMKRALFPGSFDPFTKGHLDTVERAAKLFDEVVIGVFINTSKKSLFPPEERMTLITKAVSHLPNVKVMHQENQLTVETAKEIGADALIRGIRSIKDFEYEREIAQMNHHLYDELETVFLLAKPEYSHVSSSILKEVLHFGGDVSSYLPPVINEALAGKRESNES
3ND6 Chain:E ((3-158))-KIALFPGSFDPMTNGHLNLIERSAKLFDEVIIGVFI------LFTPEEKKYLIEEATKEMPNVRVIMQETQLTVESAKSLGANFLIRGIRNVKDYEYEKDIAKMNQHLAPEIETVFLLAEEPYAHVSSSLLKEVLRFGGDVSDYLPPNIYHALKQK------


General information:
TITO was launched using:
RESULT:

Template: 3ND6.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 695 -89193 -128.33 -594.62
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain E : 0.90

3D Compatibility (PKB) : -128.33
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.90
QMean score : 0.522

(partial model without unconserved sides chains):
PDB file : Tito_3ND6.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3ND6-query.scw
PDB file : Tito_Scwrl_3ND6.pdb: