Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNKEEIVESLATITILFDEPLMNYTFTKTGGPADVLAFPKKQEEVKQIIDYCR----IHDIPWMVLGNASNLIVQDGGIRGVVIMLTEMKQIHVKGTMVIAEAGASLIDTTYAALAESLTGFEFACGIPGSVGGAVYMNAGAYGGEIKDVFAEVDLLLE-DGTLKTLTKDEMVFSYRHSKVQE--LRAIVLEARFSLQTG-D--Y---EA-I------------KARMDE-LTELRQSK----QP--LEYPSCGSVFKRPVG------------------------------HYTGQLIQQAGL-QGLKWGG---AQVSEKHAGFIVNIDHATATDYIELIAHIQEVIKEKFDVSLETEVRIIGEKQAISETSRSLAN
5JZX Chain:C ((46-404))---------FAGAHIAEAVPLAPLTTLRVGPIARRVITCTSAEQVVAALRHLDSAAKTGADRPLVFAGGSNLVIAENLTDLTVVRLA-NSGITIDGNLVRAEAGAVFDDVVVRAIEQGLGGLECLSGIPGSAGATPVQNVGAYGAEVSDTITRVRLLDRCTGEVRWVSARDLRFGYRTSVLK-AVP-TVVLEVEFALDPSGRSAPLRYGELIAALNATSGERADPQAVREAVLALRARKGMVLDPTDHDTWSVGSFFTNPVVTQDVYERLAGDAATRKDGPVPHYPAPDGVKLAAGWLVERAGFGKGYPDAGAAPCRLSTKHALALTNRGGATAEDVVTLARAVRDGVHDVFGITLKPEPVLIGCM------------


General information:
TITO was launched using:
RESULT:

Template: 5JZX.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 1533 -38082 -24.84 -132.69
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain C : 0.72

3D Compatibility (PKB) : -24.84
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.72
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_5JZX.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JZX-query.scw
PDB file : Tito_Scwrl_5JZX.pdb: