Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMNIIDELTWRDAINQQTNEERLRELVEEKSISLYCGVDPTGDSMHIGHLIPFMMMKRFQLAGHHPYILIGGGTGTIGDPSGRKTERVLQTMEQVQHNVDALSNQMRKLF----------GKDANIT----FVNNYDWLSKISLLEFLRDYGKNFNINTMLAKDIVASRLEVG--ISFTEFTYQILQSIDFLHLHKTYDVQLQIGGADQWGNITAGLDLI------------RKLEGPEA---EAFGLTIPLMLKADGTKFGKTAGGAVWLDPKKTSPFEFYQFWLNQDDRDVVKYLKFFTFLSQEEIEDLAKKVETEPEKREAQRRLAEEVTRFVHSEEDLKEAQKITQALFSGNIKELNAEEIAQGFGKMPNVEISSTPENIVELLVSTKIEPSKRQAREDVSNGAISINGDRVTDLNFVINPSDEFDGKFVVIRKGKKNYFLAKVID
1Y42 Chain:X ((52-388))-----------------TKEHIAELMRTRRIGAYVGIDPTAPSLHVGHLLPLMPLFWMYLEGYKAFTLIGGSTAKIGDPTG-----------DATMNMTKIHYQLKKLWENVDTQMRARGYEADWARKRGIVNNNHWWNKQPMLEVLRRVGHALRIGPMLSRDTVKNKMTQGDGVSFAEFTYPIMQGWDWFELFYQQGVQMQIGGSDQYGNIISGLEVVKAARESEPDPQERKYVTPKTALDECVGFTVPLLTDSSGAKFGKSAGNAIWLDPYQTSVFDFYGYFVRRSDQEVENLLKLFTFMPISEITKTMEEHIKDPSKRVAQHTLAREVVTLVHGKQEASAAEDQHRMMYTG-----------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 1Y42.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain X - contact count / total energy / energy per contact / energy per residue : 1265 -44890 -35.49 -152.17
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain X : 0.76

3D Compatibility (PKB) : -35.49
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.567

(partial model without unconserved sides chains):
PDB file : Tito_1Y42.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1Y42-query.scw
PDB file : Tito_Scwrl_1Y42.pdb: