Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMINKKPRIPSPVQIPEHLSFLQGFRDYLVAQTVSPHTRNAYLSDLIQCSEIHKKNRLPDWTSDDISDVLIELTKVGKSPRSIARCLSALRQFYKSLREQKLRSDNPVATHHSPKIGRALPKDLSEEDVEALIQAPDITTALGLRDRAMFEVLYACGLRVSELLNLRLELINLKQGYLRI-TGKGNKERLVPLGQYACDWVERYLNEARPQLYKSSTDYLFLTQHGGIMSRQNFWYAIKRYALQANIQ--AELSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVAQVRMQQLHEKHHPRG
1AIH Chain:C ((5-161))------------------------------------------------------------------------------------------------------------------------AFLYERDIYRLLAECDNS--RNPDLGLIVRICLATGARWSEAETLTQSQVMPY--KITFTNTKSKKNRTVPISDELFDMLPKK------------RGRLFND----------AYESFENAVLRAEIELPKGQLTHVLRHTFASHFMMNGGNILVLKEILGHSTIEMTMRYAHFAPSHLESAVK------


General information:
TITO was launched using:
RESULT:

Template: 1AIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 625 -58594 -93.75 -380.48
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain C : 0.64

3D Compatibility (PKB) : -93.75
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.464

(partial model without unconserved sides chains):
PDB file : Tito_1AIH.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1AIH-query.scw
PDB file : Tito_Scwrl_1AIH.pdb: