Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MHCPFCNAADSKVIDSRLAAEGCQIRRRRECVSCGERFTTFESYEVVMPRVIKSNGKNEPFDEAKLRRSLMHALQKRPVTQEQIETVLSDIQLQIRRLGERDVKSRTIGEIVMQSLFALDHVAYVRFASVYQDFQDVEAFRRQIEQMQQREH 3H87 Chain:A ((17-152)) -------TDQRWLIDKSALVRLTDSPDMEIWSNRIERGLVHIT--GVTRLEVGFSAECGEIARREFREPPLSAMPVEYLT-PRIEDRALEVQTLLADRG----HHRGPSIPDLL-IAATAELSGLTVLHVDKDFDAIAALTGQKTERLTHR-

General information: TITO was launched using: RESULT: Template: 3H87.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 590 -40845 -69.23 -300.33 target 2D structure prediction score : 0.57 Monomeric hydrophicity matching model chain A : 0.66 3D Compatibility (PKB) : -69.23 2D Compatibility (Sec. Struct. Predict.) : 0.57 1D Compatibility (Hydrophobicity) : 0.66 QMean score : 0.411

(partial model without unconserved sides chains): PDB file : Tito_3H87.pdb: (Unconserved sides chains are recalculated) : Sequence: align-3H87-query.scw PDB file : Tito_Scwrl_3H87.pdb: