Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MALFNSTSWAKYSVIAASLAGVMMLGGCAKKEEHTTTTLNIGYQKYG---ILPILKARGDLEKALKDQGVQVKWVEFPAGPQLLEGLNVGSVSLGEAGEAPPIFAQA--ANPNLVYVANQPAAPKAEALLVQKDSPIQSIKDLKGKRVALNKGSNVHYLLLKVLEANHLSLSDIQPVYLPPSDARAAFEKEAVDAWVIWDPFFAAAEHQIQAR--VLATGE---NLVSNHQFYLADRKFAENNPKVLNTVVQTLNQTTQWVSTHQDEAAKLLEKPTA-LEFDVLKTSISRMG--FG--VQPISDKVAQEQQYVADAFYAQKLIPNKLTIQEAILKLK 4NMY Chain:B ((5-299)) ---------------------------------SKKVTMVLDWTPNTNHTGLFVALDKGYYK----EEGLDVEIVQPPE-SGAETLVATGKADFGISYQEQVTYAKTSEDPLPIKAVATVI-QHNTSGFASPKEKNITTAKDFEGKTYGGWGSPSEEAVFKAVMKKNRADFNKLKIVNTGQDDFFAAM--KTVDFAWIFEGWDAVKADLIGYDLNFIPVKDLDERLDYYTPLIISNETVLKDNPELAKKFLKATTKGYEYAIKNPEESAKILVKHAPEVDEKLALKSQEYLASKYKDDAPRWGEMKDSVWNNYTSFLKEYKLIDKDMKASDAYTNE-

General information: TITO was launched using: RESULT: Template: 4NMY.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1521 76407 50.23 272.88 target 2D structure prediction score : 0.71 Monomeric hydrophicity matching model chain B : 0.69 3D Compatibility (PKB) : 50.23 2D Compatibility (Sec. Struct. Predict.) : 0.71 1D Compatibility (Hydrophobicity) : 0.69 QMean score : 0.447

(partial model without unconserved sides chains): PDB file : Tito_4NMY.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4NMY-query.scw PDB file : Tito_Scwrl_4NMY.pdb: