Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence MSFTSRLKKELFIKAQNLVPQHQLSRVVGKVAASENPI----LKAAVIHAFKTKYGIDLSIAEQGNALKYKSFNDFFTRALKDGVRLVDENPDSIVSPADGAISQIGKITAGKVFQAKGQSFSVEKLIGDPQLAQPFQEGEFATVYLSPRDYHRVHMPFSGILTETLYVPGELFSVNQVTAENVPGLFARNERMVCLFDTELGRMAVVLVGAMIVAGIETVATGKVKPSGRIELQHHELKLEKGAELGRFYLGSTAIILFEKDKIEWEKRFKAESVVVMGERMGHTL 5LQJ Chain:A ((3-216)) DTKEQRILRYVQQNAKPGDPQSVLEAIDTYCTQKEWAMNVGDAKGQIMDAVIREYSPS-LVLELGAYCGYSAVR--MARLLQPGARLLTMEIN----PDCAAITQQMLNFAGLQDKVTILNGASQDLI--PQLKKKYDVDTLDMVFLDH--WKDRYLPDTLLLEK-------------------CGLLRKG--------------TVLLADNVIVPGTPDFLA-YVRGSSSFECTHYSSYLEY----------MKVVDGLEKAIYQGPS------------------

General information: TITO was launched using: RESULT: Template: 5LQJ.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1163 11211 9.64 53.38 target 2D structure prediction score : 0.59 Monomeric hydrophicity matching model chain A : 0.63 3D Compatibility (PKB) : 9.64 2D Compatibility (Sec. Struct. Predict.) : 0.59 1D Compatibility (Hydrophobicity) : 0.63 QMean score : 0.277

(partial model without unconserved sides chains): PDB file : Tito_5LQJ.pdb: (Unconserved sides chains are recalculated) : Sequence: align-5LQJ-query.scw PDB file : Tito_Scwrl_5LQJ.pdb: