Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDILENPLELCGFAFIEFVSKE--NELDPIFETIGFSKVAKHKSK--KAYLWRQGNINIILNYQPES--YASFFFNEHGPSACAMGFKTRDAAKAFKKAVELGAEPMYSKVGP-MELNIPAIKGIGGMPIFLVDCDIY----ENDFVFFDDAQ-RNPEGAGLKEIDHLTHNVYKGRMEYWANFYEKIFNFQEIRYFDIKGEYTGLTSKALTAPDGMIRIPLNEDSDK-GNGQIAEFLADFNGEGIQHIAFICDDLISTWDKLKGLGLKFMTPPPNTYYEMLEERLPEHGEPTEELKQRCILLDGSTKDGQKKLLLQIFSENMIG--PVFFEFIQRKDDDGFGEGNFKALFESIERDQIRRGVLEAK
2R5V Chain:A ((2-348))--------QNFEIDYVEMYVENLEVAAFSWVDKYAFAVAGTSRSADHRSIALRQGQVTLVLTEPTSDRHPAAAYLQTHGDGVADIAMATSDVAAAYEAAVRAGAEAVRAPGQHSAAVTTATIGGFGDVVHTLIQRDGTSAELPPGFTGSMDVTNHGKGDVDLLGIDHFAICLNAGDLGPTVEYYERALGFRQIFDEHIVVGAQAMNSTVVQSASGAVTLTLIEPDRNADPGQIDEFLKDHQGAGVQHIAFNSNDAVRAVKALSERGVEFLKTPG-AYYDLLGERITLQTHSLDDLRATNVLADEDH----GGQLFQIFTASTHPRHTIFFEVIERQGAGTFGSSNIKALYEAVELERTG-------


General information:
TITO was launched using:
RESULT:

Template: 2R5V.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1874 50143 26.76 151.49
target 2D structure prediction score : 0.56
Monomeric hydrophicity matching model chain A : 0.75

3D Compatibility (PKB) : 26.76
2D Compatibility (Sec. Struct. Predict.) : 0.56
1D Compatibility (Hydrophobicity) : 0.75
QMean score : 0.369

(partial model without unconserved sides chains):
PDB file : Tito_2R5V.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2R5V-query.scw
PDB file : Tito_Scwrl_2R5V.pdb: