Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMNAPVALTPELLTQLTAIVGENRIKTDADSLENWGKDHTKHFNPNPSVIVFPSTTEQVQEVVKLANQFNIAITPSGGRTGLSAGAV-----ATKGEIVISMDKMNQILEFFPADRMVRVQAGVVTEQLQNYAEEQGMYYP--VDFASAGSSQIGGNIGTNAGGIKVIKYGMTRNWVLGLTVV-----------------TGKGDILRLNKGMIKNA-----------TGYALQH----------------LFIGGEGTLGLVTEAEIKLE--RQPQNLQVLVLGVPDFDAVMPVLHAFQKDID--LTAFEFFGELTMQKVLDRGHVQRPFETQCPFYVLLEFEAPYEPIIDKAMEIFEHCMEQGWVLDGVMSQSLDQVESLWRLREDISESIAPFIP-YKNDISVLITHVPAFIREIDAIVQE-----NYPYFEICWFGHIGDGNLHLNILKPENLTKDEFFAKCQVVNKYVFDTVKKYDGSISAEHGVGMTKKPYLEYSRSAEEIEYMKALKKVFDPKGIMNPG-----KLFDL
1F0X Chain:A ((9-567))-------NKAFLNELARLVGSSHLLTDPAKTARYRKGFRSG-QGDALAVVFPGSLLELWRVLKACVTADKIILMQAANTGLTEGSTPNGNDYDRDVVIISTLRLDKLHVL-GKGEQVLAYPGTTLYSLEKALKPLGREPHSVIGSSCIGASVIGG-ICNNSGGSLVQRGPAYTEMSLFARINEDGKLTLVNHLGIDLGETPEQILSKLDDDRIKDDDVRHDGRHAHDYDYVHRVRDIEADTPARYNADPDRLFESSGCAGKLAVFAVRLDTFEAEKNQQVFYIGTNQPEVLTEIRRHILANFENLPVAGEYMHRDIYDIA-ELPPRMKNWRDKYEHHLLLKMA---GDGVGEAKSWLVDYFKQA--EGDFFVCTPEEGSKAFLHRFAAAGAAIRYQAVHSDEVEDILALDIALRRNDTEWYEHLPPEIDSQLVHKLYYGHFMCYVFHQDYIVKKGVD-------VHALKEQMLELLQQRGAQYPAEHNVGHLYKAP----------ETLQKFYRENDPTNSMNPGIGKTSKRKNW


General information:
TITO was launched using:
RESULT:

Template: 1F0X.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2479 15991 6.45 36.68
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : 6.45
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.471

(partial model without unconserved sides chains):
PDB file : Tito_1F0X.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1F0X-query.scw
PDB file : Tito_Scwrl_1F0X.pdb: