Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPIAKLKREKRKDPLWGIILSIIVGSVL---MIYPLSYDISGWRPLFMLMIMLFWVVCQPTWCGVWFAFGMGIFTDLLLDAPLGLNALSFVIVTFITRFLIRERRILTFGNLWTIATLVIIAHLAFMWVTQTMGGIHFSIARHWQPLMTSILTWPVVYYCLAKWRI---------
5IQJ Chain:A ((4-134))-------MDERFNAALHESAHTVIAQVLGFNTATPIIYENSSTNPD------------EKHWLGKAFI-----------DTTNG-NVEDIALVGLAGEAIQYYIEGVD------------VGDCPFIWECNLED-ISLSDQELVKDLYNDVELWEKLYTLFEQHHDSILDLANSI


General information:
TITO was launched using:
RESULT:

Template: 5IQJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 482 -46765 -97.02 -392.98
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -97.02
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.397

(partial model without unconserved sides chains):
PDB file : Tito_5IQJ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IQJ-query.scw
PDB file : Tito_Scwrl_5IQJ.pdb: