Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEKLQQYAIGQRWLSDTETELGLGVLIDVDERSVSILFPKSDETRVYARNNA-PLSRIIFNTNDEVQDQEGQKWIVESVEDRHGVLRYNVLRTLENGEQERKALNETRIGAQIQLSKPLDRLLASQIDYKEWYDLRIEAMLMQAQMQTSPLCGLVGARVGLIPHQLYIAHEVGKRFAPRVLLADEVGLGKTIEA----GLIIHQQLKTGRSERILILVPDSLQYQWMIEMRRRFNLQFSLFDLTRTASIKEHDPELNPFLTEQ---CIIASVDLMVDHDDLREQALEVGFDLLVVDEAHHLMWSEEEGGNDRYDLVEELAE-NTAGVLLLTATPEQLGVESHFARLRLLDPQRFSSLERFLDEEAQYQQTAQVAEVLMSDEPLTQEHLTALEGLLGHSIEDQPEQRFRAIHELLDRHGTGRILFRNTREAIQGFPGRDCQPAPLPAPADWSKDGKLREQMWPEEAQ----------------IDGSWMQNDPRVPWLMEILRKELKHK-KVLLIARSGPVVESLESALRLHAGIRTAMFHEGMSLLERDQAAAYFAEESYGAQILLC-SEIGSEGRNFQFASDLILFDLPANPDVLEQRIGRLDRIGQENRIQIHVPYLMGTAQERMFRWYNEALNIFSNISPTAQTLQENFIVELKDCLLADQGQTFEDLLEEVN-----------VQRQALEAELQAGRDRLLEYNSCRPIVAQEIVQALEDYDDNTTLPMFVKRFMSSTNIDFDEQSNGTVIIRPTDQMQVQGLALDEEGMTATFYRDQAQMREDAQYLTLEHPFIESVMEMIRTQSFGSTNVAVLKSNALKQGSVLLEVWFKVDVVAPKSLNLPSSLPKQLIRVLLSENGQDLSEKIDPTILKPYLHHLDGNSCRQVVKARREVIEERYKQALDIAKEGLPQLQQQAKEHYGNKWQYEIDRLTYLKQFNPSIRQDEIERLQKLQKEGLSLLDGLTVTPEAIQVLVVVKP
5JXR Chain:A ((7-639))------------------------SKEDDTLRRFRYLLGLTDLFRHFIETNPNPKIREIMKEIDRQNEEEARQ---RKRGGRQGGATSERRRRTEAEEDAELLKDEKDGGSAETVFRESPPFIQGTMR-----DYQIAGLNWLISLHENGISGIL---------------------------ADEMGLGKTLQTIAFLGYLRHIMGITGP---HLVTVPKSTLDNWKREFEKWTP---EVNVLVLQGAKEERHQLINDRLVDENFDVCITSYEMILR---EKAHLKKFAWEYIIIDEA---------------SLAQVIRMFNSRNRLLITGTPLQNNLHELWALLNFLLPDVFGDSEAFDQWFSGQDR---------DQDTVVQQLHRVLRPFLLRRVKSDVEKSLLPKKEINVYIGMSEMQVKWYQKILE----KDIDAVNGAGGKRESKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIYNAGKMVVLDKLLKRIQKQGSRVLIFSQMSRLLDILEDYCVFR-GYKYCRIDGSTAHEDRIAAIDEYNKPGSDKFIFLLTTRAGGLGINLTTADIVILYDSDWNPQADLQAMDRAHRIGQTKQVVVYRFVTDNAIEEKVLERAAQKLRLDQLVIQQGRAQVAAKAAANKDELLSMIQHGAEKVFQTKGAFGTMAEKGSQLDDDDIDAILQAGETRTKELNARYEKLGIDDLQKF---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5JXR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 2779 98656 35.50 168.07
target 2D structure prediction score : 0.52
Monomeric hydrophicity matching model chain A : 0.63

3D Compatibility (PKB) : 35.50
2D Compatibility (Sec. Struct. Predict.) : 0.52
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.328

(partial model without unconserved sides chains):
PDB file : Tito_5JXR.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5JXR-query.scw
PDB file : Tito_Scwrl_5JXR.pdb: