Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMQQMWTDIDEYIDSHLIPEDPRLDFALKNTDEHGFSNHLAVAPNQGMFLQMLIQMNKCKRVLEIGTFAAYSTIWLGRALPEDGYLLTIEGRDTHAEMAQKNIDHANLPVKVDLKLGRAADVLSAIDPQSIEPFDFIFIDADKQGYPEYLELSLKFSKSGTIIVLDNVIRAGAILN--PENKKPSIEGIRETFKALENHPQILSCTALQTVGSKGHDGFAIAIVK
4OA5 Chain:F ((53-190))--------------------------------------------EGQMLQLLIRMAGIHSIVEVGTCVGFSAICMAHALPSKGHIYTIEKDYENVVTANQNIVNCKLEDKITVLHGEALAQLNTL--KEMAPFDMIFIDANKSSYLAYLNWAKMYIRKGGLIVADNTFLFGSVFDEHPTEKVSS----------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4OA5.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 615 -94998 -154.47 -698.51
target 2D structure prediction score : 0.73
Monomeric hydrophicity matching model chain F : 0.70

3D Compatibility (PKB) : -154.47
2D Compatibility (Sec. Struct. Predict.) : 0.73
1D Compatibility (Hydrophobicity) : 0.70
QMean score : 0.578

(partial model without unconserved sides chains):
PDB file : Tito_4OA5.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4OA5-query.scw
PDB file : Tito_Scwrl_4OA5.pdb: