Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-------------MAEFIAVILI-----------------------TILAVISPGADFAIV---TKNSYLYG--RKIGVFTSLGISLGVLVHVTYTLVAVAF----VMTYTPQILNIVKYIGA--LYLIYIGYKTFTQKPVLETTALTAIGTFQAIKYGFFTNALNPKTTLFVISTYT-------QIVSLTTPKSI-------LLAYGF-----FMSFAHFVWFSLVAVLFSSMLLRQKMLAKQVQINR---VIGSILCVLG---------VILLFTKFQ-
5L45 Chain:B ((19-299))SHMKILVTGARGSIGSRVAGKLVERGLPVRGGVRDLAAPGLPEGVEAVQADLTRPETLARALEGVDKVFLYTVPEGIAGFVDEARAAGVRHVVLLSSIAVTWPDADRDPIGRMHLAVERPIEESGLGWTFVRPEALATNALGWAPEIRGGDMVRCAYPGAYTTPVHEEDIADVVVAALTTPGHRSAAYALTGPETLTQAEQVALIGEALGRAVRCERMPEQEARAVLEGLYPAEVVDAILAGQAARDGRPAEVLDTIRAVTGRPARTFREWAGDHVAAFRP


General information:
TITO was launched using:
RESULT:

Template: 5L45.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 993 -114430 -115.24 -566.49
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain B : 0.67

3D Compatibility (PKB) : -115.24
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.120

(partial model without unconserved sides chains):
PDB file : Tito_5L45.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5L45-query.scw
PDB file : Tito_Scwrl_5L45.pdb: