Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software) Input alignment information: Query sequence -MTLYKTIWTLLKANKSNLLIGVIITVVATFFFAQNIDVE-NTSLQD--AKIALISEEESPVVDGLRKYLNDKETVVTLDGTSQKEIDDALYFNRVNIILHLPADFTEQVEVGKMATI-KIQSRPDAFSKTVVTQQVNTFLQTLILFQEEDKTIDAAMEQTQMALSVTGEVELSAGYSQRMKKLLTGTTFNFLSYGLFLSIFSGFSVINLAFNRKEISKRNQSAPITKRNLNRKVTFSLISYSLLLFSGFLLLMVLLVIHTSWDITVWYHILNTFLFLLPIISFSACITSLVKNSETSGGIKDIFITGSCFIGGVFVPAEYLPEMVSKIAAFTPTYWFVQNNNLISETLSYNQTFAESFWFNGCVLVAFAAVFSMIQFILGKERNYRWQPNWAKN 4AUI Chain:A ((20-327)) DVTLYGTIKA-----------GVETSRSVAHHGAQADRVKTATEIADLGSKIGFKGQEDLG---------NGLKAIWQLEQKAYVSGTDTGWGNRQS-FIGLKGGF-GKVRVGRLNNILKDTGNFNPWEGK------SYYSGLSNIAQPEERHVSVRYDSPEFAGFSGSVQYVPNDNSGKNRSESYHAGFNYKNDGFFVQYAGSYKRHNYTTEKHQVHRLVGG---YDHDALYASVAVQQQDAKLTWRDD----NSHNSQTEVATTVAYRFGNV----TPRVSYAHGFKGSVYDADHDNTYDQVVV-----------GAEYDFS--KRTSALVSAGWLQKGKG--------------------------AEKFVATVGGVGLRHKF---------

General information: TITO was launched using: RESULT: Template: 4AUI.pdb Alignment : align.pir Tito was launched with SMD and SCWRL Tito text output Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1608 40307 25.07 133.02 target 2D structure prediction score : 0.26 Monomeric hydrophicity matching model chain A : 0.62 3D Compatibility (PKB) : 25.07 2D Compatibility (Sec. Struct. Predict.) : 0.26 1D Compatibility (Hydrophobicity) : 0.62 QMean score : 0.112

(partial model without unconserved sides chains): PDB file : Tito_4AUI.pdb: (Unconserved sides chains are recalculated) : Sequence: align-4AUI-query.scw PDB file : Tito_Scwrl_4AUI.pdb: