Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceGRRVPVKRPQSRTRAPDPPKEDRKPISCVVKMCESVGDGKRSKVRCIERQKLYPGGSHTFQEDGKNSITVSLDGNCNKSLSGRTNNPRIGFVVEKLYRPEDPLLAAISKYFEPPRAPHYQ
2LJK Chain:A ((1-117))-GSMSGEPGQTSVAPPPEEVEPGSGVRIVVEYCEPCGFEATYLELASAVKEQYPGIEIESRLGGTGAFEIEINGQLVFSKLENGGFPYEKDLIEAIRRASNGETLEKITNSRPPCVIL--


General information:
TITO was launched using:
RESULT:

Template: 2LJK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 359 -6250 -17.41 -53.42
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -17.41
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.336

(partial model without unconserved sides chains):
PDB file : Tito_2LJK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2LJK-query.scw
PDB file : Tito_Scwrl_2LJK.pdb: