Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMPLRKMKIPFLLLFFLWEAESHAASRPNIILVMADDLGIGDPGCYGNKTIRTPNIDRLASGGVKLTQHLAASPLCTPSRAAFMTGRYPVRSGMASWSRTGVFLFTASSGGLPTDEITFAKLLKDQGYSTALIGKWHLGMSCHSKTDFCHHPLHHGFNYFYGISLTNLRDCKPGEGSVFTTGFKRLVFLPLQIVGVTLLTLAALNCLGLLHVPLGVFFSLLFLAALILTLFLGFLHYFRPLNCFMMRNYEIIQQPMSYDNLTQRLTVEAAQFIQRNTETPFLLVLSYLHVHTALFSSKDF---------------------------------------------------AGKSQHGVYGDAVEEMDWSVGQILNLLDELRLANDTLIYFTSDQGAHVEEVSSKGEIHGGSNGIYKGGKANNWEGGIRVPGILRWPRVIQAGQKIDEPT--SNMDIFPTVAKLAGAPLPEDRIIDGRDLMPLLEGKSQRSDHEFLFHYCNA-------YLNAVRWHPQNSTSIWKAFFFTPNFNPVGSNGCFATHVCFCFGSYVTHHDPPLLFDISKDPRERNPLTPAS--EPRFYEILKVMQEAADRHTQTLPEVPDQFSWNNFLWKPWLQLCCPSTGLSCQCDREKQDKRLSR
3B5Q Chain:B ((15-445))------------------------EKPNFLIIQCDHLTQRVVGAYGQTQGCTLPIDEVASRGVIFSNAYVGCPLSQPSRAALWSGMMPHQTNVRSNSSEP------VNTRLPENVPTLGSLFSESGYEAVHFGKTHDMGS------------LRGFKHKEPVAKP-----FTD-----------P-------------------------------------------EFPV----------------------NNDSFLDVGTCEDAVAYLSNPPKEPFICIADFQNPHNICGFIGENAGVHTDRPISGPLPELPDNFDVEDWSNIPTPVQYICCSHRRMTQAAHWNEENYRHYIAAFQHYTKMVSKQVDSVLKALYSTPAGRNTIVVIMADHGDGMASHRMV------------TKHISFYDEMTNVPFIFAGPGIKQQKKPVDHLLTQPTLDLLPTLCDLAGIAVPA--EKAGISLAPTLRGEKQKKSHPYVVSEWHSEYEYVTTPGRMV------RGPRYKYTHYL-------------------------EGNGEELYDMKKDPGERKNLAKDPKYSKILAEHRALLDDYITRS----------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3B5Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 2277 -36717 -16.13 -99.50
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain B : 0.61

3D Compatibility (PKB) : -16.13
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.61
QMean score : 0.446

(partial model without unconserved sides chains):
PDB file : Tito_3B5Q.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3B5Q-query.scw
PDB file : Tito_Scwrl_3B5Q.pdb: