Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMAACTARRALAVGSRWWSRSLTGARWPRPLCAAAGAGAFSPASTTTTRRHLSSRNRPEGKVLETVGVFEVPKQNGKYETGQLFLHSIFGYRGVVLFPWQARLYDRDVASAAPEKAENPAGHGSKEVKGKTHTYYQVLIDARDCPHISQRSQTEAVTFLANHDDSRALYAIPGLDYVSHEDILPYTSTDQVPIQHELFERFLLYDQTKAPPFVARETLRAWQEKNHPWLELSDVHRETTENIRVTVIPFYMGMREAQNSHVYWWRYCIRLENLDSDVVQLRERHWRIFSLSGTLETVRGRGVVGREPVLSKEQPAFQYSSHVSLQASSGHMWGTFRFERPDGSHFDVRIPPFSLESNKDEKTPPSGLHW
5DMA Chain:A ((4-22))---------------------------------------------------------------------------GWKVGDRANHRKWG-IGTVV---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 5DMA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 26 -2466 -94.83 -129.76
target 2D structure prediction score : 0.26
Monomeric hydrophicity matching model chain A : 0.54

3D Compatibility (PKB) : -94.83
2D Compatibility (Sec. Struct. Predict.) : 0.26
1D Compatibility (Hydrophobicity) : 0.54
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_5DMA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5DMA-query.scw
PDB file : Tito_Scwrl_5DMA.pdb: