Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------------------MIQWWQILLLTLYSAYQICDELTIVSSAG-----SPVFAGFITGLIMGDVTTGLLIGGNLQLFVLGVGTFGGASRIDATSGAVLATAFSVSQGIDAPLAIT-TIAVPVAALLTYFDVLGRMTTTFFAHRVDAAIERFDYK---GIERNYLLGAIPWALSRALPVFFALAFGGAFVQ-SVVDFVEAYKWVAD----GLTLAGRMLPGL----GFAILLRYLPVKRNLHYLAMGFGLTA-----MLTVLYSYVTGLGGAV--------------AGIVGTLPAEVAQKIGFVNN-FKGLSMIGISIVGIFLAVLHFKNSQ---KVAVAAPSTPSESGEIEDDEF------------
1DIK Chain:? ((2-380))AKWVYKFEEGNASMRNLLGGKGCNLAEMTILGMPIPQGFTVTTEACTEYYNSGKQITQEIQDQIFEAITWLEELNGKKFGDTEDPLLVSVRS-AARASMPGMMDTILNLGLN-DVAVEGFAKKTGNPRFAYDSYRRFIQMYSDVVMEVPKSHFEKIIDAMKEEKGVHFDTDLTADDLKELAEKFKAVYKEAMNGEEFPQEPKDQLMGAVKAVFRSWDNPRAIVYRRMNDIPGDWGTAVNVQTMVFGNKGETSGTGVAFTRNPSTGEKGIYGEYLINAQGEDVVAGVRTPQPITQLENDMPDCYKQFMDLAMKLEKHFRDMQDMEFTIEEGKLYFLQTRNGKRTAPAALQIACDLVDEGMITEEEAVVRIEAKSLDQL


General information:
TITO was launched using:
RESULT:

Template: 1DIK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1572 -49718 -31.63 -166.28
target 2D structure prediction score : 0.51
Monomeric hydrophicity matching model chain A : 0.66

3D Compatibility (PKB) : -31.63
2D Compatibility (Sec. Struct. Predict.) : 0.51
1D Compatibility (Hydrophobicity) : 0.66
QMean score : 0.177

(partial model without unconserved sides chains):
PDB file : Tito_1DIK.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1DIK-query.scw
PDB file : Tito_Scwrl_1DIK.pdb: