Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMRIMGLDVGSKTVGVAISDPLGFTAQGLEIIQINEEQGQFGFDRVKELVDTYKVERFVVGLPKNMNNTSGPRVEASQAYGAKLEEFFGLPVDYQDERLTTVAAERMLIEQADISRNKRKKVIDKLAAQLILQNYLDRKF
1NU0 Chain:A ((3-138))GTLMAFDFGTKSIGVAVGQRITGTARPLPAIKAQD--GTPDWNIIERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDERLSTVEA--------GGYRALNKGKVDSASAVIILESYMEQGY


General information:
TITO was launched using:
RESULT:

Template: 1NU0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 561 -57760 -102.96 -447.75
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain A : 0.81

3D Compatibility (PKB) : -102.96
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.587

(partial model without unconserved sides chains):
PDB file : Tito_1NU0.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1NU0-query.scw
PDB file : Tito_Scwrl_1NU0.pdb: