Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTVTIDWENLGFSYMKLPYRYLAHFKNGQWDQGELTEDATLHISESSPSLHYGQQAFEGLKAYRTKDGSVQLFRPDENAKRLQRTCDRLLMPQVPTDMFVEACKAVVRANEEYVPLYGIGGTLYLRPLLIGVGDIIGVKPAEEYIFTIFAMPVGNYFKGGLVPTNFLIQDEYDRAAPNGTGAAKVGGNYAASLLPGKMAKSRHFSDVIYLDPSTHTKIEEVGSANF---FGITADNEFVTP-LSPSILPSITKYSLLYLAEHRLGLTPIEGDVPIDNLDRFVEAG------ACGTAAVISPIGGIQHGD-DFHVFYSETEVGPVTRKLYNELTGIQFGDIEAPEGWIVKVD
3DTG Chain:B ((54-372))-----------------------------WHNAQVIPYGPIQLDPSAIVLHYGQEIFEGLKAYRWADGSIVSFRPEANAARLQSSARRLAIPELPEEVFIESLRQLIAVDEKWVPPAGGEESLYLRPFVIATEPGLGVRPSNEYRYLLIASPAGAYFKGGIKPVSVWLSHEYVRASPGGTGAAKFGGNYAASLLAQAQAAEMGCDQVVWLDAIERRYVEEMGGMNLFFVFGSGGSARLVTPELSGSLLPGITRDSLLQLATD-AGFAVEERKIDVDEWQKKAGAGEITEVFACGTAAVITPVSHVKHHDGEFTI--ADGQPGEITMALRDTLTGIQRGTFADTHGWMARLN


General information:
TITO was launched using:
RESULT:

Template: 3DTG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1598 -62511 -39.12 -202.96
target 2D structure prediction score : 0.63
Monomeric hydrophicity matching model chain B : 0.79

3D Compatibility (PKB) : -39.12
2D Compatibility (Sec. Struct. Predict.) : 0.63
1D Compatibility (Hydrophobicity) : 0.79
QMean score : 0.455

(partial model without unconserved sides chains):
PDB file : Tito_3DTG.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3DTG-query.scw
PDB file : Tito_Scwrl_3DTG.pdb: