Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MSQKLYNMKFAAVYLALIAKV-ERKGGKAESVHQVTSWLTGYEVSDVLACLDRDVTYGDFFRQAPYYVPERIAITGKICGVRIEEIDDPLMQEIRRLDKLVDWLAKGKTSQQVLEKYEKHK
4HR1 Chain:A ((2-119))FNGAQTVIQKISWLRTAIAFLKGYMETTGATKKELEQVEKLKE--RVDEIATAVNWDV-YAQYARGDFNLLSDDEYKEIQKALLVLEDIKEQIIVEMLRVGLAQGQMGTLKISDYLDSLDS---


General information:
TITO was launched using:
RESULT:

Template: 4HR1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 337 -21891 -64.96 -192.02
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain A : 0.67

3D Compatibility (PKB) : -64.96
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.307

(partial model without unconserved sides chains):
PDB file : Tito_4HR1.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4HR1-query.scw
PDB file : Tito_Scwrl_4HR1.pdb: