Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKNIRIGSYHWMQTTNGQLSFKEKIKLIQKIMVPSILSSIKINYYRFQTGNDFDIGQIVIPDTQMIKIALEELESKASISIYNHSWRTYFWGAALGHLQNQQFDPESLLLASLFHDIG-LTEQHMHSKGCQCFTYESAKQFEQKAKEYNFDDKKSEVIKDAICLHMNGYIEDSDPPEVVLLQQGASCDVISDNQYKLPLSFRNKILEKYPRNQFNKEFIKLINLERKNVPNSRTGLLYDLGLPLMIKSNLYNENLI
4N6W Chain:A ((39-225))---------------------------------------------------------MSLSNSSKVSVLISLLEKSRDLDYIGEAINQLEHSLQCAYFAQRSGADNEMVLAALLHDLGHYCNGGYGVWQ-------HEKVGADYLRGLGFSERVACLIE--GHVAAKRYLVSSKASYLKNLSDASRKTLEYQGG-----PMDEGERRLFEEREDFKDCLKIRAWDEKGKQTDLKVPGPEHYRKMMEEHLSE-----


General information:
TITO was launched using:
RESULT:

Template: 4N6W.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 856 13028 15.22 72.78
target 2D structure prediction score : 0.61
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : 15.22
2D Compatibility (Sec. Struct. Predict.) : 0.61
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.341

(partial model without unconserved sides chains):
PDB file : Tito_4N6W.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4N6W-query.scw
PDB file : Tito_Scwrl_4N6W.pdb: