Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGRDTVFLKVESRLGYDFSGDIKIGGKYTSLIEHAGLVFISGQIPRVGDTVQICGKVGLDVDLSDAQLAASISTMRALAILKQHYGTLDVIGKVLQMNVFVHSTSSFIQQSEVADGASEILYEILGLDT---GRHTRTSVSVYQLPKNASVEINFIFALK
1J7H Chain:C ((8-130))-----------------TEKAPAAIGPYVQAVDLGNLVLTSGQIPVNPATGE----VPADI-VAQ----ARQSLENVKAIIEKAGLTAA---DIVKTTVFVKDLNDFAAVN-------AEYERFFK-ENNHPNFPARSCVEVARLPKDVGLEIEAIAVRK


General information:
TITO was launched using:
RESULT:

Template: 1J7H.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain C - contact count / total energy / energy per contact / energy per residue : 558 -29111 -52.17 -242.59
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain C : 0.67

3D Compatibility (PKB) : -52.17
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.67
QMean score : 0.468

(partial model without unconserved sides chains):
PDB file : Tito_1J7H.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1J7H-query.scw
PDB file : Tito_Scwrl_1J7H.pdb: