Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMHLAQRLAAVVLTLGLSAGLVGCGFHLKGTNPTATPLVYKKLSL-ELPAKTDDLETQLKVYLTANGVQLSNDNDAYVLRVLEYTPRRQLL----NGKLTEVLLRLTVTFQIEDRQGNKITEPRTLTAARSYQYDLATVNTENQQESYLQRIVIDDLAQQITRQISANRLPKAQP
5IVA Chain:B ((3-151))--------------------NTSGFQLRGLG-DAQ-FALKEIDVSARNAY-GPTVRELKETLENSGVKVTSN-APYHLVLVREDNQQRTVSYTGSARGAEFELTNTINYEIVGANDLVLM-SNQVQVQKVYVHDENNLIGSDQEAAQLRSEMRRDLIQQLSMRLQALTPAQLDE


General information:
TITO was launched using:
RESULT:

Template: 5IVA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 496 25141 50.69 174.59
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.64

3D Compatibility (PKB) : 50.69
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.420

(partial model without unconserved sides chains):
PDB file : Tito_5IVA.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-5IVA-query.scw
PDB file : Tito_Scwrl_5IVA.pdb: