Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLIHLFFRNNKKSKMHLKLNNYLISGEYMNIPRFGLGTFRLKEQAVIDSVKNALDVGYRAIDTAQIYENEAAIGQAIAESGVSRQDLFLTTKIWVDNFAQDKFIPSLKESLQKLRTDHVDLTLIHWPAPDLGVSIPEIMQLLLEAKQQGLTKQIGISNFNIALTQQAIDTIGVEHIATNQIELSPYLQNHKLVNFLQEKNIDVTSYMTLAYGKVLQDPVLAEIAAANKATTAQIALAWALQRGFAVIPSSTKRENLISNLKAQDIELTAAEMQMIAELDRNSREVSPEPWAPVWD
3WBY Chain:B ((25-277))------------------------------MPQIGLGVWETPPDETAEVVKEAVKLGYRSVATARLYKNEEGVGKGLED----HPEIFLTTKLWNDEQGYDSTLRAYEESARLLRRPVLDLYLIHWPMPAQGQYV-ETWKALVELKKSGRVKSIGVSNFESEHLERIMDATGVVPV-VNQIELHPDFQQRALREFHEKHNIRTESWRPLGKGRVLSDERIGKIAEKHSRTPAQVVIRWHLQNGLIVIPKSVNPKRLAENLDVFGFVLDADDMQAIEQMDRKDGRMGADP------


General information:
TITO was launched using:
RESULT:

Template: 3WBY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1338 -107164 -80.09 -423.57
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain B : 0.76

3D Compatibility (PKB) : -80.09
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.76
QMean score : 0.537

(partial model without unconserved sides chains):
PDB file : Tito_3WBY.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3WBY-query.scw
PDB file : Tito_Scwrl_3WBY.pdb: