Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMLLEFTKMHGLGNDFMVVD-LISQRAYLDTATIQRLADRHFGVGFDQLLIVEPPDVPEADFKYRIFNADGSEVEQCGNGVRCFARFVHE-RHLTNKTNITVQTKAGIVKPELGQNGWVRVNMGYPKFLPNEIP--FVADEPEALYTLELANDQ-NISIDVVNMGNPHAVTIV----PDVLTADV--AGIGPQVESHKRFPERINAGFMQVIDDKHVRLRVFERCVGETLACGTGACAAAVSGMRRGLLANSVEVELAGGKLQIEW-QEGDVVWMTGPTTHVYDGRLDLRYFQG
3EKM Chain:B ((26-307))-VLHFVKYHGLGNDFILVDNRDSSEPKITQEQAAKLCDRNFGVGADGV-IFAMPGVNGTDYAMRIFNSDGSEPEMCGNGVRCFARFIAELENLQGKHSFTIHTGAGLIVPEIQDDGQVKVDMGTPILKAQDVPTKLSGNKGEAVVEAELVVDGVSWNVTCVSMGNPHCITFGKKGGPNLKVDDLNLPEIGPKFEHHEMFPARTNTEFVEVLSRSHLKMRVWERGAGATLACGTGACALVVAAVLEGRADRKCTVDLPGGPLEIEWKQEDNHIYMTGPAEAVFYG---------


General information:
TITO was launched using:
RESULT:

Template: 3EKM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1684 -19913 -11.82 -73.75
target 2D structure prediction score : 0.62
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -11.82
2D Compatibility (Sec. Struct. Predict.) : 0.62
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_3EKM.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3EKM-query.scw
PDB file : Tito_Scwrl_3EKM.pdb: