Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMVEWLLRLEPWQQALAGTAFTYFMTALGAGLVFFFKEIKKEVLNLMLGFASGVMIAASFWSLLDPAITKAEENGDIAWLVVSIGFGLGGVFLYMADKTLPHMHFGPQHEAEGLPTHLKRTILLVFSITLHNIPEGLAVGVAFGAAATADNPTAAILAAVSVALGIGIQNFPEGAAVSIPLRQEGLSRKKAFVYGQASGIVEPIAGVIGALLVTKVELLLPYALAFAAGAMIYVVVEELIPEAQQTLSSKRHFAVFGVMSGFIIMMILDVALG---
1RR9 Chain:A ((10-191))--------------RVGQVTGLAWTEVGGDLLTIETACVPGKGKLTYTGSLGEVMQESIQAALTVVRARAEKLG------------------------------------------INPDFYEKRDIHVH-VPEG---------ATPKDGPAAGIAMCTALVSCLTGNPVRADVAMTGEITL--------------RGQVLPIGG------------LKEKLLAAHRGGIKTVLIPFENKRDLEEIP-DNVIADLDIHPVKRIEEVLTLALQNEP


General information:
TITO was launched using:
RESULT:

Template: 1RR9.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1043 -179632 -172.23 -1003.53
target 2D structure prediction score : 0.40
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -172.23
2D Compatibility (Sec. Struct. Predict.) : 0.40
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.315

(partial model without unconserved sides chains):
PDB file : Tito_1RR9.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1RR9-query.scw
PDB file : Tito_Scwrl_1RR9.pdb: