Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMDAKMNLKQLAGIEAAKFVKDGMIVGLGTGSTAYYMVEEIGRRM-REEGLRITGVTTSNATKEQAEKLGIPLKSIDEVPVVDLTIDGADEISADFQGIKGGGAALLFEKIVATYSKETIWIVDSSKLVDKLG-KFPLPVEVIPYGSQQL---LHIFEEKRFQPVLRTDENGEVLTTDGGHYIIDLHLEVIEQPESLATYLDELVGVVEHGLFLNMVSKVVVGSEKGVEILDAIRRK
1LK7 Chain:B ((6-228))------MKKIAAKEALKFIEDDMVIGLGTGSTTAYFIKLLGEKLKRGEISDIVGVPTSYQAKLLAIEHDIPIASLDQVDAIDVAVDGADEVDPNLNLIKGRGAALTMEKIIEYRAGTFIVLVDERKLVDYLCQKMPVPIEVIPQAWKAIIEELSIFNAKA-ELRMGVNKDGPVI-TDNGNFIIDAKFPRIDDPLDMEIELNTIPGVIENGIFADIADIVIVGTREGVKKLE-----


General information:
TITO was launched using:
RESULT:

Template: 1LK7.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 1268 -14519 -11.45 -66.60
target 2D structure prediction score : 0.55
Monomeric hydrophicity matching model chain B : 0.81

3D Compatibility (PKB) : -11.45
2D Compatibility (Sec. Struct. Predict.) : 0.55
1D Compatibility (Hydrophobicity) : 0.81
QMean score : 0.519

(partial model without unconserved sides chains):
PDB file : Tito_1LK7.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1LK7-query.scw
PDB file : Tito_Scwrl_1LK7.pdb: