Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMTTEHFDLANPVTKVDDIPDYEMYSQTIDSLNKRFGNRVLKGIKIGYIA-SEKDRIIDYLADKDYDLKLLSVHHNGQFDYLDDEVKDMDPAIVIPQYFAQLSEALVVIEADVFAHFDYGFRVFGLSVAEFKQYEAQFLPILDQVIKNKLAFELNAKSAYLYDNLALYEYVIDLCLSRGGTLF
2W9M Chain:B ((360-494))GTADHSRAAYYAN-GLTIERLREQLKEIRELQRA-GLPIVAGSEVDILDDGSLDFPDDVLG--ELDYVVVSVHSNFT----------L----DAARQTERLIRAVSHPLVTVLGHATGRLLLRRP------GYALDLDAVLGACEANGTVVEINANAAR-----------------------


General information:
TITO was launched using:
RESULT:

Template: 2W9M.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 582 -26129 -44.89 -194.99
target 2D structure prediction score : 0.60
Monomeric hydrophicity matching model chain B : 0.63

3D Compatibility (PKB) : -44.89
2D Compatibility (Sec. Struct. Predict.) : 0.60
1D Compatibility (Hydrophobicity) : 0.63
QMean score : 0.315

(partial model without unconserved sides chains):
PDB file : Tito_2W9M.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2W9M-query.scw
PDB file : Tito_Scwrl_2W9M.pdb: