Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence-----------MMRTMLISLSVGVYMHVPVQATTQTIKVVRTSVSETTDSPITITHTFTDANGKQLLPA--LTSYNKVSYPPTINHYWLIPNKTLWTSETGSSV----PLSIFSDMTDPTKGDQLKQITDILNHALTDIKDGGSAQVSYVYE---KDYSQFERKKIDVLAGTKVSISDLVERLKNADGTQGDMSKVISNNGNIVDTTNTGTSTISLSYFDPIALKTMTASAVIHVRADQTAIKGKDLHLRTGESYAPKDLVEYVTKSDGTSGNKEEIKMNGTVDTTTPGEYPVVLTYIDSKTSNVAETTAVVYVEASAASSTVITHFIDSQTNKELQAETHMSSVNRIPDLRLPA---EFSDRVPNIDLS----TYEQN---GKVTSI--SDWMQANGLDRK-----SHWSEILEVLHSELM------------------NNRKQSGGEITFTYVYIPDNRSLEGHDLIVHPNEKINKEELIQSATNSLGKP-VPLKDVSVTINEVP-LEDGYLTKQTGDFTIM---YSYHDPYSL----QELHAQSLLHVLPLNKQIDQKEQKRQEESLSEKKQQMAHAVS------------------PTGKVK--------------QTRSLELARISRKISESNKTIRQEAHLAPQVSGLENEILEPKIKQQSEKEFVAKQSEDQKESDDQKETKKKRLSTIDSTDEHLQPQ-VPLPSPGTPAPGGGIPSSALGDFMRGMAGTWVYANRNEFDADDWF--------------
2QZV Chain:A ((3-779))GCGCPCGCGAMATEEAIIRIPPYHYIHVLDQNSNVSRVEVGPKTYIRQDNE---RVLFAPVRMVTVPPRHYCIVANPVSRDTQSSVLFDITGQVRLRHADQEIRLAQDPFPLYPQVVLPNTALHLKALLDFEDKNGDKVMAGDE----WLFEGPGTYIPQKEVEVVEIIQATVIKQNQALRLRARKECFDREGKGRVTGEEWLVRSVGAYLPAVFEEVLDLVDAVILTEKTALHLRALQNFRDLRGVLHRTGEEWLVTV------QDTEAHVPDVYEEVLGVVPITTLKSFFLQ----PGERLERGIQDVYVLSEQQGLLLKALQPLEEGESEEKVSHQAGDCWLIRGPLEYVPSAKVEVVEERQAIPLDQNEGIYVQDVKTGKVRAVIGSTYMLTQDEVLWEKELPSGVEELLNLGHDPLADRGQKGTAKPLQPSAPRNKTRVVSYRVPHNAAVQVYDYRAKRARVVFGPELVTLDPEEQFTVLSLSAGRPKRPHARRALCLLLGPDFFTDVITIETADHARLQLQLAYNWHFELKNRNDPAEAAKLFSVPDFVGDACKAIASRVRGAVASVTFDDFHKNSARIIRMAVFGFEMSEDTGPDGTLLPKARDQAVFPQNGLVVSSVDVQSVEPVDQRTRDALQRSVQLAIEITTNSQEAAAKHEAQRLEQEARGRLERQKILDQSEAEKARKELLELEAMSMAVESTGNAKAEAESRAEAARIEGEGSVLQAKLKAQALAIETEAELERVKKVREMELIYARAQLEL


General information:
TITO was launched using:
RESULT:

Template: 2QZV.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1914 98186 51.30 153.90
target 2D structure prediction score : 0.41
Monomeric hydrophicity matching model chain A : 0.64

3D Compatibility (PKB) : 51.30
2D Compatibility (Sec. Struct. Predict.) : 0.41
1D Compatibility (Hydrophobicity) : 0.64
QMean score : 0.101

(partial model without unconserved sides chains):
PDB file : Tito_2QZV.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2QZV-query.scw
PDB file : Tito_Scwrl_2QZV.pdb: