Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKENFKRSVSRMNAFRSFQVIKEP--------------VFHTAISDLPFTELAENEVLVKIAYSDVNYKDALAMSES-------------GQV----IRTYPMTPGIDLSGTVVQSNN--PRFSKEDLVLATGFG--------------------LGV-THPGGYSQYQKVPGDWLVPLPKNMTLRQAMILGTAGFTAMLCVNALIRQGMTSDKKVVVTGASGGVGSTAIALLHKLGFQSIIAFSRKEESVTWLKSLGALQVVRPDEFL-----------------P-ETTKA-LGKQQIDYVIDTVGGEQLSSLLPLISYNGAVALCGNAGGIKLNATVLPFILRNIQLIGIDSVNVPIDQRLSLWQQMADLQIA--DEL-VVQEITLDQLPETASKLLAGTHQGRTLVNVGDHK
3KRT Chain:A ((22-420))------IAALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANPICVVSSPQKA-EICRAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFAN------YREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGKVGVL-----


General information:
TITO was launched using:
RESULT:

Template: 3KRT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 1742 -38391 -22.04 -118.86
target 2D structure prediction score : 0.50
Monomeric hydrophicity matching model chain A : 0.69

3D Compatibility (PKB) : -22.04
2D Compatibility (Sec. Struct. Predict.) : 0.50
1D Compatibility (Hydrophobicity) : 0.69
QMean score : 0.413

(partial model without unconserved sides chains):
PDB file : Tito_3KRT.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3KRT-query.scw
PDB file : Tito_Scwrl_3KRT.pdb: