Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMEEESMRIACYGVRPNEIDFFE-KLNIYHYDLSLYEELLTHDNIVSAKDHDAVLLRGNCIADETNLAKMQEYGIRYVFTRTVGVNHIDLQAAADFGMTVARVPSYSPNAIAELSLTFAMMLLRNTAYTTIRTSFKDFRVDEQMFSREIRNCTVGIIGTGRIGLTEAVLFKGLGAKVIGYDIHQTEAAKKV-LTFHSLEELLAKSDIVSIHVPHIPGENDQMINEGFLAQMKKGSILINTARGELQDNEAILRALKSNHLAGFATDVFANETEVFFRSFKPWETIPDPAIQ--------QLVEMYPRVLVTPHVGSNTDEALSNMISTSFENFREIIETGKTKNEVSLPKARQLR
4ZGS Chain:F ((34-368))----TTRCICYSTTQYVKDFLAGPMQKVFTDTYFVEPPLDKDTAQLARGYDVAVLFVNDRADASVIKELAKAGVKLIALRCAGFDRVDLHACAEHGVRVVRVPTYSPESVAEHAVALIFALNRHLTDAYIRVRMGNYSL-SGLVGVEMRHKVVGVVGTGAIGQQAARILKGIGCKVFAYDIKPNPAVEAMGIPYVSLDELLAMSDIVTLHCPLLP-STRQLINKESIQKMKKGVMLINVSRGGLIDSAALFDALESGQIGALGLDVYENEGGLFFVDHTKF----DPSVRMQKWDRQFRTLLSYPQVLVTPHTAFLTEEALNNICTTTIQNIADYVLDRPLGNEV---------


General information:
TITO was launched using:
RESULT:

Template: 4ZGS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain F - contact count / total energy / energy per contact / energy per residue : 1653 -24747 -14.97 -76.14
target 2D structure prediction score : 0.64
Monomeric hydrophicity matching model chain F : 0.78

3D Compatibility (PKB) : -14.97
2D Compatibility (Sec. Struct. Predict.) : 0.64
1D Compatibility (Hydrophobicity) : 0.78
QMean score : 0.533

(partial model without unconserved sides chains):
PDB file : Tito_4ZGS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4ZGS-query.scw
PDB file : Tito_Scwrl_4ZGS.pdb: