Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMHKGWSGHFFCAQNEKGSEKMAEITLEFDTIAAISTPPGEGAISIVRLSGDQAVQLADKVYQSGNKRLSEVPSHTIHYGHIVDPKSNQLVDEVMVSVMRAPKTFTREDVVEINCHGGIVVVNQILQLLLREGARLAEPGEFTKRAFLNGRVDLSQAEAVMDLIRAKTDKAMGLALNQLDGNLSALIRSLRQEILETLAQVEVNIDYPEYDDVEELTTKLLLEKAQMIQQRIQALLATSKQGKVLREGLSTAIIGRPNVGKSSLLNHLLREEKAIVTDIAGTTRDVIEEYVNVRGVPLKLIDTAGIRETEDVVERIGVERSRKALAEADLILLVLNQSEPLTAEDEQLLEATSGLKRIIL-----LNKTDLPAQLEQEKLKKLIENEPVFSISVAKNDGLDRLESAISDLFFSGETGERDATYVSNTRHIALLEKASLSLEEVIAGIDSGMPVDLVQIDMTRCWDYLGEVVGDSVQDELITQLFSQFCLGK
4KYU Chain:B ((7-163))----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------AIVGRPNVGKSTIFNRIA-----------------IYSSAEW-NYDFNLIDTGGIDIGDEPFLAQIRQQAEIAMDEADVIIFMVNGREGVTAADEEVAKILYRTKKPVVLAVNKLDNTEMRANIYD--FYSLGFGEP-YPISGTHGLGLGDLLDAVAEHF--------------------------------------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4KYU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 667 -33284 -49.90 -248.39
target 2D structure prediction score : 0.68
Monomeric hydrophicity matching model chain B : 0.59

3D Compatibility (PKB) : -49.90
2D Compatibility (Sec. Struct. Predict.) : 0.68
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.525

(partial model without unconserved sides chains):
PDB file : Tito_4KYU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4KYU-query.scw
PDB file : Tito_Scwrl_4KYU.pdb: