Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMIKVLLVDDHEMVRLGVSSYLSIQEDIEVIGEAENGRQGYEKAMTLRPDVILMDLVMEEMDGIESTKAILKDWPEAKIIIVTSFIDDEKVYPAIEAGAAGYLLKTSTAHEIADAIRATQRGERVLEPEVTTKMMEKMSRRNEPVLHEELTNRENEILMLISEGKSNQEIADELFITLKTVKTHVSNILAKLEVEDRTQAAIYAFKHGLVK
4LDZ Chain:B ((5-191))MISIFIAEDQQMLLGALGSLLNLEDDMEVVGKGTTGQDAVDFVKKRQPDVCIMDIEMPGKTGLEAAEE-LKD-TGCKIIILTTFARPGYFQRAIKAGVKGYLLKDSPSEELANAIRSVMNGKRIYAPE----LMEDLYSEANP-----LTDREKEVLELVADGKNTKEIAQELSIKSGTVRNYISMILEKLEVKNRIE------------


General information:
TITO was launched using:
RESULT:

Template: 4LDZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 811 -90508 -111.60 -484.00
target 2D structure prediction score : 0.58
Monomeric hydrophicity matching model chain B : 0.80

3D Compatibility (PKB) : -111.60
2D Compatibility (Sec. Struct. Predict.) : 0.58
1D Compatibility (Hydrophobicity) : 0.80
QMean score : 0.443

(partial model without unconserved sides chains):
PDB file : Tito_4LDZ.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4LDZ-query.scw
PDB file : Tito_Scwrl_4LDZ.pdb: