Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMKIKAALFDLDGVLVDTARYHYEAWLVLANQLSIPFTEKENEQLKGISRTESLERLLSFGKMEQKFSEKEKSAFAEQKNNLYLQAIQKMDETSVLPGAIAVLEYLKKTNIKIGLGSASKNARLILEKTNLTSYFDVLIDGTQVSKAKPDPEVFLKGAQQLNVPPNACLVIEDSEAGCQAALAGNMHVLGIGENINLPSAEYVIPDLTVFDQVRSFWHLSEAVSRI
3NAS Chain:B ((3-211))----AVIFDLDGVITDTAEYHFLAWKHIAEQIDIPFDRDMNERLK----EESLESILIFGGAETKYTNAEKQELMHRKNRDYQMLISKLTPEDLLPGIGRLLCQLKNENIKIGLASSSRNAPKILRRLAIIDDFHAIVDP---------PDIFLTAAAM----PADCAAIEDAEAGISAIKSAGMFAVGVGQGQPMLGADLVVRQTSDLTLEL------------


General information:
TITO was launched using:
RESULT:

Template: 3NAS.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain B - contact count / total energy / energy per contact / energy per residue : 873 -128214 -146.87 -667.78
target 2D structure prediction score : 0.66
Monomeric hydrophicity matching model chain B : 0.74

3D Compatibility (PKB) : -146.87
2D Compatibility (Sec. Struct. Predict.) : 0.66
1D Compatibility (Hydrophobicity) : 0.74
QMean score : 0.612

(partial model without unconserved sides chains):
PDB file : Tito_3NAS.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3NAS-query.scw
PDB file : Tito_Scwrl_3NAS.pdb: